iTerms for gene TGFB2 - Transforming growth factor, beta 2
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The following symbols -- -- represent GO terms, UniProt keywords, and species. You can click on an iTerm to see sentences containing it. Clicking on the arrow next to the iTerm will open a window with additional information. You can select to see iTerms co-occurring with a specific species, or you can select to see iTerm of a specific category. Additionally, you can click on the iTerm(s) for which you want to see documents containing them. For more information about this page, please visit the User Guide.

       
       

Functions and Processes

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Rank
iTerm
 
Textual variants:
transformation, transform, transformations, transformed, transforming
Bigrams:
Document Frequencies:
1419 abstracts - 70.42% (Query Set)
9278 abstracts - 3.09% (Background Set)
 
Textual variants:
cytokine, cytokines
Document Frequencies:
450 abstracts - 22.33% (Query Set)
9433 abstracts - 3.14% (Background Set)
 
Textual variants:
proliferation, proliferate, proliferated, proliferating, proliferations, proliferative
Bigrams:
Document Frequencies:
469 abstracts - 23.28% (Query Set)
15145 abstracts - 5.05% (Background Set)
 
Textual variants:
humor, humoral, humors, humour
Bigrams:
Document Frequencies:
78 abstracts - 3.87% (Query Set)
1196 abstracts - 0.40% (Background Set)
 
Textual variants:
cell proliferation, cells proliferated, cells proliferation
Unigrams:
cells (1422 abstracts) - see sentences
proliferation (469 abstracts) - see sentences
Document Frequencies:
180 abstracts - 8.93% (Query Set)
5737 abstracts - 1.91% (Background Set)
 
Textual variants:
emt
Document Frequencies:
66 abstracts - 3.28% (Query Set)
70 abstracts - 0.02% (Background Set)
 
Textual variants:
neutralizer, neutralize, neutralized, neutralizers, neutralizes, neutralizing
Bigrams:
Document Frequencies:
101 abstracts - 5.01% (Query Set)
1547 abstracts - 0.52% (Background Set)
 
Textual variants:
morphogenesis, morphogenic, morphogenetic
Document Frequencies:
129 abstracts - 6.40% (Query Set)
1678 abstracts - 0.56% (Background Set)
 
Textual variants:
concentrations, concentrate, concentrated, concentration
Document Frequencies:
298 abstracts - 14.79% (Query Set)
25041 abstracts - 8.35% (Background Set)
 
Textual variants:
differentiation, differentiate, differentiated, differentiating
Bigrams:
Document Frequencies:
349 abstracts - 17.32% (Query Set)
16734 abstracts - 5.58% (Background Set)

Pathways and Signaling

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Rank
iTerm
 
Textual variants:
smad, smads
Bigrams:
Document Frequencies:
101 abstracts - 5.01% (Query Set)
541 abstracts - 0.18% (Background Set)
 
Textual variants:
signaling pathways, signal pathway, signaling pathway, signalling pathways, signalling pathway
Unigrams:
signaling (547 abstracts) - see sentences
pathways (364 abstracts) - see sentences
Document Frequencies:
168 abstracts - 8.34% (Query Set)
9129 abstracts - 3.04% (Background Set)
 
Textual variants:
smad signaling, smad signalling, smad signals
Unigrams:
signaling (547 abstracts) - see sentences
smad (101 abstracts) - see sentences
Document Frequencies:
27 abstracts - 1.34% (Query Set)
81 abstracts - 0.03% (Background Set)
 
Textual variants:
transduction pathways, transduction pathway
Unigrams:
Document Frequencies:
24 abstracts - 1.19% (Query Set)
187 abstracts - 0.06% (Background Set)
 
Textual variants:
outflow pathways, outflow pathway
Unigrams:
pathways (364 abstracts) - see sentences
outflow (44 abstracts) - see sentences
Document Frequencies:
9 abstracts - 0.45% (Query Set)
14 abstracts - 0.00% (Background Set)
 
Textual variants:
smad pathways, smad pathway
Unigrams:
pathways (364 abstracts) - see sentences
smad (101 abstracts) - see sentences
Document Frequencies:
11 abstracts - 0.55% (Query Set)
36 abstracts - 0.01% (Background Set)

Diseases and Malignancies

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Rank
iTerm
 
Textual variants:
fibrosis, fibre, fibres, fibrous, fibrotic
Document Frequencies:
205 abstracts - 10.17% (Query Set)
2147 abstracts - 0.72% (Background Set)
 
Textual variants:
glaucoma
Bigrams:
Document Frequencies:
79 abstracts - 3.92% (Query Set)
286 abstracts - 0.10% (Background Set)
 
Textual variants:
cataract, cataractous, cataracts
Document Frequencies:
53 abstracts - 2.63% (Query Set)
363 abstracts - 0.12% (Background Set)
 
Textual variants:
poag
Bigrams:
Document Frequencies:
33 abstracts - 1.64% (Query Set)
92 abstracts - 0.03% (Background Set)
 
Textual variants:
opacification
Document Frequencies:
33 abstracts - 1.64% (Query Set)
42 abstracts - 0.01% (Background Set)
 
Textual variants:
proliferative vitreoretinopathy
Unigrams:
Document Frequencies:
35 abstracts - 1.74% (Query Set)
26 abstracts - 0.01% (Background Set)
 
Textual variants:
wound, wounded, wounding, wounds
Bigrams:
Document Frequencies:
103 abstracts - 5.11% (Query Set)
1470 abstracts - 0.49% (Background Set)
 
Textual variants:
pvr
Bigrams:
Document Frequencies:
29 abstracts - 1.44% (Query Set)
36 abstracts - 0.01% (Background Set)
 
Textual variants:
ocular
Document Frequencies:
58 abstracts - 2.88% (Query Set)
723 abstracts - 0.24% (Background Set)
 
Textual variants:
capsule opacification
Unigrams:
Document Frequencies:
20 abstracts - 0.99% (Query Set)
7 abstracts - 0.00% (Background Set)

Cellular Components

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Rank
iTerm
 
Textual variants:
collagen, collagenous, collagens
Bigrams:
Document Frequencies:
275 abstracts - 13.65% (Query Set)
3355 abstracts - 1.12% (Background Set)
 
Textual variants:
antibody, antibodies
Document Frequencies:
285 abstracts - 14.14% (Query Set)
20051 abstracts - 6.68% (Background Set)
 
Textual variants:
capsule, capsules
Document Frequencies:
45 abstracts - 2.23% (Query Set)
484 abstracts - 0.16% (Background Set)
 
Textual variants:
collagen type i
Unigrams:
collagen (275 abstracts) - see sentences
type i (151 abstracts) - see sentences
Document Frequencies:
27 abstracts - 1.34% (Query Set)
236 abstracts - 0.08% (Background Set)
 
Textual variants:
basement membrane, basement membranes
Unigrams:
based (107 abstracts) - see sentences
membranes (103 abstracts) - see sentences
Document Frequencies:
20 abstracts - 0.99% (Query Set)
446 abstracts - 0.15% (Background Set)

Cells, Cell Types, and Cell Lines

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Rank
iTerm
 
Textual variants:
fibroblasts, fibroblast, fibroblastic
Bigrams:
Document Frequencies:
297 abstracts - 14.74% (Query Set)
5915 abstracts - 1.97% (Background Set)
 
Textual variants:
epithelial cells, epithelium cell, epithelial cell, epithelium cells
Unigrams:
cells (1422 abstracts) - see sentences
epithelial (386 abstracts) - see sentences
Document Frequencies:
233 abstracts - 11.56% (Query Set)
5925 abstracts - 1.98% (Background Set)
 
Textual variants:
meshwork cells
Unigrams:
cells (1422 abstracts) - see sentences
meshwork (59 abstracts) - see sentences
Document Frequencies:
32 abstracts - 1.59% (Query Set)
0 abstracts - 0.00% (Background Set)
 
Textual variants:
tm cells, tm cell
Unigrams:
cells (1422 abstracts) - see sentences
tm (44 abstracts) - see sentences
Document Frequencies:
36 abstracts - 1.79% (Query Set)
30 abstracts - 0.01% (Background Set)
 
Textual variants:
basic fibroblast
Unigrams:
fibroblasts (297 abstracts) - see sentences
basic (74 abstracts) - see sentences
Document Frequencies:
54 abstracts - 2.68% (Query Set)
31 abstracts - 0.01% (Background Set)
 
Textual variants:
endothelial cells, endothelial cell
Unigrams:
cells (1422 abstracts) - see sentences
endothelial (190 abstracts) - see sentences
Document Frequencies:
100 abstracts - 4.96% (Query Set)
4160 abstracts - 1.39% (Background Set)
 
Textual variants:
receptor, receptors
Bigrams:
Document Frequencies:
517 abstracts - 25.66% (Query Set)
29914 abstracts - 9.97% (Background Set)
 
Textual variants:
rpe cells, rpe cell
Unigrams:
cells (1422 abstracts) - see sentences
rpe (47 abstracts) - see sentences
Document Frequencies:
41 abstracts - 2.03% (Query Set)
139 abstracts - 0.05% (Background Set)
 
Textual variants:
myofibroblasts, myofibroblast, myofibroblastic
Document Frequencies:
46 abstracts - 2.28% (Query Set)
184 abstracts - 0.06% (Background Set)
 
Textual variants:
osteoblasts, osteoblast, osteoblastic
Document Frequencies:
63 abstracts - 3.13% (Query Set)
1266 abstracts - 0.42% (Background Set)

Pharmaceuticals

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Rank
iTerm
 
Textual variants:
type i collagen
Unigrams:
collagens (275 abstracts) - see sentences
type i (151 abstracts) - see sentences
Document Frequencies:
38 abstracts - 1.89% (Query Set)
544 abstracts - 0.18% (Background Set)
 
Textual variants:
retinoic acid
Unigrams:
Document Frequencies:
40 abstracts - 1.99% (Query Set)
1133 abstracts - 0.38% (Background Set)
 
Textual variants:
acid, acids
Bigrams:
Document Frequencies:
152 abstracts - 7.54% (Query Set)
15715 abstracts - 5.24% (Background Set)
 
Textual variants:
prostaglandin e2
Unigrams:
e2 (33 abstracts) - see sentences
prostaglandin (30 abstracts) - see sentences
Document Frequencies:
18 abstracts - 0.89% (Query Set)
229 abstracts - 0.08% (Background Set)
 
Textual variants:
thymidine
Document Frequencies:
19 abstracts - 0.94% (Query Set)
436 abstracts - 0.15% (Background Set)
 
Textual variants:
brdu
Document Frequencies:
19 abstracts - 0.94% (Query Set)
202 abstracts - 0.07% (Background Set)
 
Textual variants:
type ii collagen
Unigrams:
collagens (275 abstracts) - see sentences
type ii (127 abstracts) - see sentences
Document Frequencies:
15 abstracts - 0.74% (Query Set)
1 abstracts - 0.00% (Background Set)

Techniques and Treatments

Expand
Rank
iTerm
 
Textual variants:
elisa
Document Frequencies:
169 abstracts - 8.39% (Query Set)
4103 abstracts - 1.37% (Background Set)
 
Textual variants:
lens, lenses
Bigrams:
Document Frequencies:
73 abstracts - 3.62% (Query Set)
669 abstracts - 0.22% (Background Set)
 
Textual variants:
stimulated, stimulate, stimulates, stimulating, stimulation, stimulations, stimulator, stimulators
Bigrams:
Document Frequencies:
368 abstracts - 18.26% (Query Set)
21838 abstracts - 7.28% (Background Set)
 
Textual variants:
surgery
Bigrams:
Document Frequencies:
101 abstracts - 5.01% (Query Set)
1999 abstracts - 0.67% (Background Set)
 
Textual variants:
staining, stain, stained, stainings, stains
Document Frequencies:
191 abstracts - 9.48% (Query Set)
9033 abstracts - 3.01% (Background Set)
 
Textual variants:
immunohistochemistry
Document Frequencies:
169 abstracts - 8.39% (Query Set)
6407 abstracts - 2.14% (Background Set)
 
Textual variants:
evaluated, evaluate, evaluates, evaluating, evaluation, evaluations
Document Frequencies:
293 abstracts - 14.54% (Query Set)
24290 abstracts - 8.10% (Background Set)
 
Textual variants:
organ cultures, organ culture
Unigrams:
cultured (585 abstracts) - see sentences
organ (77 abstracts) - see sentences
Document Frequencies:
31 abstracts - 1.54% (Query Set)
198 abstracts - 0.07% (Background Set)
 
Textual variants:
cocultures, coculture, cocultured, co-culture, co-cultured, co-cultures
Document Frequencies:
56 abstracts - 2.78% (Query Set)
698 abstracts - 0.23% (Background Set)
 
Textual variants:
vitrectomy
Bigrams:
Document Frequencies:
15 abstracts - 0.74% (Query Set)
14 abstracts - 0.00% (Background Set)

Anatomical Parts