PMID: 3497398

 

    Legend: Gene, Sites

Title : Amino acid sequence of the von Willebrand factor-binding domain of platelet membrane glycoprotein Ib

Abstract :
  1. We report the amino acid sequence of a 299-residue segment from the alpha chain of the human platelet membrane glycoprotein Ib
  2. This includes the complete sequence of the amino-terminal tryptic fragment of 290 residues comprising the von Willebrand factor-binding domain
  3. Two primary sets of overlapping fragments were obtained by cleavage of the S-carboxymethylated protein at methionyl and lysyl bonds following treatment with cyanogen bromide and Achromobacter protease I , respectively
  4. Additional fragments were obtained by treatment of native glycocalicin with trypsin , Staphylococcus aureus V8 protease , and Serratia marcescens protease
  5. Analysis of all these fragments provided data that allowed determination of the continuous sequence corresponding to approximately half of the alpha-chain polypeptide
  6. This region of glycoprotein Ib is largely hydrophobic and contains only two N-linked and one O-linked carbohydrate chains
  7. A hydrophilic region exists between residues 215 and 299 , which contains a cluster of 10 negatively charged residues at 269-287
  8. This area is likely to attract positively charged molecules
  9. The hydrophilic, highly glycosylated (at serine and threonine residues ) region corresponding to the previously described " macroglycopeptide " and representing the carboxyl-terminal half of the alpha chain is likely to begin at residue 292
  10. The determined sequence of the alpha chain of glycoprotein Ib contains a region ( residues 29-193 ) with seven repeats, which is indicative of gene duplication and is highly homologous to human leucine-rich alpha 2-glycoprotein
  11. This protein sequence agrees completely with that deduced from the cDNA sequence reported by Lopez et al. [Lopez, J.A., Chung, D.W., Fujikawa, K., Hagen, F.S., Papayannopoulou, T. & Roth, G.J. ( 1987) Proc
  12. Natl. Acad
  13. Sci
  14. USA 84, 5615-5619]
Output (sent_index, trigger, protein, sugar, site):
  • 0. glycoprotein, , glycoprotein, -, -
  • 1. glycoprotein, , glycoprotein, -, -
  • 10. glycoprotein, , glycoprotein, -, -
  • 10. region, , -, seven repeats, region
  • 10. residues, , -, -, residues 29-193
  • 6. contains, , -, only two N-linked and one O-linked carbohydrate chains, region
  • 6. glycoprotein, , glycoprotein, -, -
  • 9. glycosylated, , -, -, serine and threonine residues
  • 9. macroglycopeptide, , -, -, macroglycopeptide
  • 9. serine, , -, -, serine and threonine residues
Output(Part-Of) (sent_index, protein, site):
  • 0. Ib, domain
  • 0. von Willebrand factor, domain
  • 10. -, region
  • 10. -, residues 29-193
  • 11. protein, sequence
  • 2. von Willebrand factor, domain
  • 4. Additional, fragments
  • 6. Ib, region
*Output_Site_Fusion* (sent_index, protein, sugar, site):

 

 

Protein NCBI ID SENTENCE INDEX