PMID: 3667593

 

    Legend: Gene, Sites

Title : Structure of the carbohydrate moiety of human interferon-beta secreted by a recombinant Chinese hamster ovary cell line

Abstract :
  1. The carbohydrate structure of the major oligosaccharide of human interferon-beta ( IFN-beta ) synthesized by a genetically engineered Chinese hamster ovary cell line has been determined
  2. Analysis of the glycopeptidase F-released carbohydrates by sequential exoglycosidase treatment, methylation analysis, and fast atom bombardment-mass spectrometry revealed that 95% of the IFN-beta oligosaccharides had the following structure: (Formula: see text)
  3. The remaining 5% of the carbohydrates are probably tri- or higher antennary oligosaccharide chains
  4. The major oligosaccharide of the recombinant IFN-beta is remarkably homogeneous with respect to terminal galactose sialylation
  5. NeuAc, which is alpha 2-3-linked to galactose in the human IFN-beta secreted by Chinese hamster ovary cells, can be re-incorporated with an alpha 2-6 linkage in vitro, into enzymatically desialylated IFN-beta using rat liver Gal beta 1-4GlcNAc alpha 2-6 sialyltransferase
  6. The sugar chain is important for maintaining protein solubility as shown by the fact that IFN-beta protein precipitates after deglycosylation with glycopeptidase F
Output (sent_index, trigger, protein, sugar, site):
  • 0. interferon-beta, , interferon-beta, the carbohydrate moiety, -
  • 1. interferon-beta, , interferon-beta, the major oligosaccharide, -
  • 4. IFN-beta, , IFN-beta, The major oligosaccharide, -
  • 5. desialylated, , IFN-beta, -, -
  • 5. galactose, , IFN-beta, galactose, -
Output(Part-Of) (sent_index, protein, site):
*Output_Site_Fusion* (sent_index, protein, sugar, site):

 

 

Protein NCBI ID SENTENCE INDEX
IFN-beta 3456 1,4,5
IFN-beta protein 3456 6
interferon-beta 3456 0,1