PMID: 8390218

 

    Legend: Gene, Sites

Title : Structural analysis on the sugar chains of human alpha 1-antitrypsin : presence of fucosylated biantennary glycan in hepatocellular carcinoma

Abstract :
  1. Chemical structures of the sugar chains of alpha 1-antitrypsin ( AAT ) from patients with hepatocellular carcinoma (HCC) and from healthy individuals with a different affinity for Lens culinaris agglutinin ( LCA ) were examined by pyridylamination of their oligosaccharides and stepwise exoglycosidase digestion in combination with reversed-phase and size-fractionation high-performance liquid chromatography
  2. We found that the LCA-reactive species of AAT from patients with HCC carried both the biantennary sugar chain with a fucose residue at the innermost N-acetylglucosamine residue, Gal beta 1-4GlcNAc beta 1-2Man alpha 1-6(Gal beta 1-4GlcNAc beta 1-2Man alpha 1-3)Man beta 1-4GlcNAc beta 1-4(Fuc alpha 1-6)GlcNAc-PA, and the biantennary chain without a fucose residue, Gal beta 1-4GlcNAc beta 1-2Man alpha 1-6(Gal beta 1-4GlcNAc beta 1-2Man alpha 1-3)Man beta 1-4GlcNAc beta 1-4GlcNAc-PA, at a ratio of about 1:0.6
  3. The LCA-nonreactive species of AAT contained the biantennary sugar chain Gal beta 1-4GlcNAc beta 1-2Man alpha 1-6(Gal beta 1-4GlcNAc beta 1-2Man alpha 1-3)Man beta 1-4GlcNAc beta 1-4GlcNAc as a major component
  4. These results indicate that a characteristic feature of the carbohydrate chains of AAT from patients with HCC is an increment in fucosylation
Output (sent_index, trigger, protein, sugar, site):
  • 0. 1-antitrypsin, , alpha 1-antitrypsin, the sugar chains, -
  • 0. fucosylated, , -, fucosylated biantennary glycan, -
  • 1. 1-antitrypsin, , alpha 1-antitrypsin, the sugar chains, -
  • 2. residue, , -, a fucose residue, residue at
  • 4. AAT, , AAT, the carbohydrate chains, -
Output(Part-Of) (sent_index, protein, site):
*Output_Site_Fusion* (sent_index, protein, sugar, site):

 

 

Protein NCBI ID SENTENCE INDEX
alpha 1-antitrypsin 5265 0,1
AAT 5265 1,2,3,4